module to control windows? programming
 

I have a 2006. I know about the reprogramming of the automatic windows when they won't work. Is there a module that controls these? or is this part of the main computer? I have a slightly different issue. My passenger and back door windows will not roll down OR up. completely dead! plus my remote fob will not lock the car. And I noticed that when I click on my drivers side window control, the little red LED lights come on momentarily on the passenger switch. I am wondering if something has fried on the controller. Anybody have any thoughts or knowledge of how to fix this?
I am thinking the FOB does not lock the doors because it detects the windows are not functional, and as a precaution, the system will not allow the doors to lock.

Any ideas???

Thanks.

Iv'e never seen window issues affecting remote keyless entry.